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Data Set Group: INIA BXD Liver DNAm Longevity Study modify this page

Data Set: NIA-UTHSC Aging BXD Liver DNAm CD-HFD (Oct20) Sesame ** modify this page
GN Accession: GN890
GEO Series: No GEO series yet
Title: Unpublished
Organism: Mouse (mm10)
Group: BXD
Tissue: Liver DNA Methylome
Dataset Status: Private
Platforms: Horvath's Mammalian Custom Array (HMA)
Normalization: Sesame
Contact Information
Khyobeni Mozhui
University of Tennessee Health Science Center
855 Monroe Ave, Suite 515
Memphis, TN 38163 USA
Tel. (901) 448-7334
kmozhui@uthsc.edu
Website
Download datasets and supplementary data files

Specifics of this Data Set:
Normalization Sesame

Summary:

DNA from liver tissue profiled on the Illumina Pan-Mammalian Infinium microarray. This array was designed and developed by Steve Horvath at UCLA. Array hybridization, initial data QC, and normalization done at UCLA. 



About the cases used to generate this set of data:


About the tissue used to generate this set of data:


About the array platform:

Pan-Mammalian DNAm Infinium array; this is a custom array



About data values and data processing:

Beta-values after normalization



Notes:


Experiment Type:

Aging



Contributor:


Citation:


Data source acknowledgment:


Study Id:
304

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GeneNetwork support from:
  • The UT Center for Integrative and Translational Genomics
  • NIGMS Systems Genetics and Precision Medicine project (R01 GM123489, 2017-2021)
  • NIDA NIDA Core Center of Excellence in Transcriptomics, Systems Genetics, and the Addictome (P30 DA044223, 2017-2022)
  • NIA Translational Systems Genetics of Mitochondria, Metabolism, and Aging (R01AG043930, 2013-2018)
  • NIAAA Integrative Neuroscience Initiative on Alcoholism (U01 AA016662, U01 AA013499, U24 AA013513, U01 AA014425, 2006-2017)
  • NIDA, NIMH, and NIAAA (P20-DA 21131, 2001-2012)
  • NCI MMHCC (U01CA105417), NCRR, BIRN, (U24 RR021760)
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