Probe Information

The table below lists information of all probes of probe set 1455931_at_A from database OHSU/VA B6D2F2 Brain mRNA M430A Probe (Aug05).

	Probe1	Sequence2	bl2seq3	Exons4	Tm °C5	Stacking Energy KBT6		Mean7	Stdev8	Probe h29	Probe Location10			SNPs (Across all strains)11	SNPs (Different alleles only between C57BL/6J and DBA/2J)11
						GSB	NSB				Chr	Start	End
1	X66375	GACGTCTAGGATCAAGGTGCCAGCA			85.47	0.098	8.617	5.74	0.21		9	54.810206	54.81023	wt37-9-54810224 MRS2727226	wt37-9-54810224 MRS2727226
2	X66376	GACGTCTAGGATGAAGGTGCCAGCA						5.48	0.19
3	378Y23	ATAAAGCATACCTTCCAGTGCGTCA			81.77	-0.45	6.926	7.79	0.26		9	54.810155	54.810179	wt37-9-54810175
4	378Y24	ATAAAGCATACCATCCAGTGCGTCA						6.51	0.21
5	411235	CAGTGCGTCACCACGTGGCTGAAAG			87.06	-0.931	6.153	8.43	0.19		9	54.81014	54.810164	wt37-9-54810140 wt37-9-54810148 wt37-9-54810150
6	411236	CAGTGCGTCACCTCGTGGCTGAAAG						9.99	0.18
7	109287	CCTTTGTCAAGGCATGCCCTCATGA			84.91	-0.62	6.079	8.15	0.26		9	54.810089	54.810113	wt37-9-54810111 wt37-9-54810112
8	109288	CCTTTGTCAAGGGATGCCCTCATGA						7.76	0.25
9	607577	TGACCTCCCAAACAGCATTGCACGG			87.06	-0.249	6.091	9.53	0.36		9	54.810059	54.810083	wt37-9-54810064	wt37-9-54810064
10	607578	TGACCTCCCAAAGAGCATTGCACGG						8.57	0.46
11	107245	CATTGCACGGTAGGTTCACACGCGA			86.48	-0.024	8.718	6.13	0.21		9	54.810044	54.810068	wt37-9-54810051 MRS2727222 wt37-9-54810064	wt37-9-54810051 MRS2727222 wt37-9-54810064
12	107246	CATTGCACGGTACGTTCACACGCGA						5.67	0.27
13	237687	TTCACACGCGAGCTGCAGGGAGTCA			89.46	0.475	8.752	5.33	0.21		9	54.81003	54.810054	wt37-9-54810041 wt37-9-54810051 MRS2727222	wt37-9-54810051 MRS2727222
14	237688	TTCACACGCGAGGTGCAGGGAGTCA						5.80	0.21
15	592235	CAGGGAGTCATCCAGACCCTAGGAT			84.28	-0.979	6.356	7.72	0.20		9	54.810015	54.810039	wt37-9-54810027 MRS2727221	wt37-9-54810027 MRS2727221
16	592236	CAGGGAGTCATCGAGACCCTAGGAT						5.99	0.20
17	315655	TAGGGTTTGTGCTCCCGACTCGAGT			86.63	-1.523	4.204	11.22	0.40		9	54.809961	54.809985
18	315656	TAGGGTTTGTGCACCCGACTCGAGT						8.15	0.26
19	177575	TGAGTTTCCCATATTACATTTCCAA			75.97	-0.537	7.182	6.40	0.22		9	54.809789	54.809813	wt37-9-54809809
20	177576	TGAGTTTCCCATTTTACATTTCCAA						6.62	0.23
21	195465	GTCCACAGAGACCATTTTGAGTATT			78.08	0.185	8.632	6.21	0.17		9	54.809743	54.809767	wt37-9-54809760
22	195466	GTCCACAGAGACGATTTTGAGTATT						5.55	0.18

• The UT Center for Integrative and Translational Genomics
• NIGMS Systems Genetics and Precision Medicine project (R01 GM123489, 2017-2021)
• NIDA NIDA Core Center of Excellence in Transcriptomics, Systems Genetics, and the Addictome (P30 DA044223, 2017-2022)
• NIA Translational Systems Genetics of Mitochondria, Metabolism, and Aging (R01AG043930, 2013-2018)
• NIAAA Integrative Neuroscience Initiative on Alcoholism (U01 AA016662, U01 AA013499, U24 AA013513, U01 AA014425, 2006-2017)
• NIDA, NIMH, and NIAAA (P20-DA 21131, 2001-2012)
• NCI MMHCC (U01CA105417), NCRR, BIRN, (U24 RR021760)