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Probe Information

The table below lists information of all probes of probe set 10593756 from database EPFL/LISP BXD CD+HFD Liver Affy Mouse Gene 1.0 ST (Apr13) RMA **.

QTL Heat Map and ClusteringCorrelation Matrix and PCA

Probe1
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Sequence2
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bl2seq3Exons4Tm °C5
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Stacking Energy KBT6Mean7
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Stdev8
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Probe h29
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Probe Location10SNPs
(Across all strains)
11
SNPs
(Different alleles only between C57BL/6J and DBA/2J)
11
GSB
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NSB
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ChrStartEnd
1 281214TCTCGATCGGATGTTTCTATGGACG
2 914947TCTATGGACGTTTCTTCTGGTTTCA
3 909304TCAATCATTGGGACGCTAGGGCTTT
4 787938TTGACAACGTCCTGCATTCTGGGTG
5 720452TCGCGTGTGAACCTACCGTGCAATG
6 368807CTTTCAGCCACGTGGTGACGCACTG
7 321816AACAATGAGTGTGAGACCAGGCGTC
8 153805GATCAAGATGAGTGGAAAATAACCC
9 119550CATCTCTGGCCATCAAGGGTTGCAG
10 150544CCATCAAGGGTTGCAGAAATAATCC
11 493136TGCAGTTCCTAAAATGCACACCAGG
12 1030359GAAAAATGCGATCAATCACCATGGC
13 326667GCTCAGCACCGTAGAAGTTCCTCGT
14 672857TGATCACGAGGAGAAAGACCGTCAG
15 26665TGCCTTGTCGTAGGACCAGGAGCCG
16 479919TCAAACGGGAAGTAGGTCACATCGA
17 619793TGCAGGGACTCGCATGAACTCCACC
18 322354GTCAGAGGGTTTCCATTTCAGCTTG
19 478992AGAGGGTTTCCATTTCAGCTTGTAG
20 603176CCATTTCAGCTTGTAGTCATTCCAG
21 750790CTTCAGCCACAGGTTGGTTTCCATG
22 734272GGTTGGTTTCCATGATCTGGTTTAC
23 1100273TGGTTTCCATGATCTGGTTTACTTC
24 342237GGTTTCCATGATCTGGTTTACTTCA
25 1035405TGATGACAGGATGGGACACGTTAGC
26 136547CACCGGCCGGATGATCTCGTTGTAA
27 588089GATCTCGTTGTAATCTTCAAACAGG
28 484346CTGGAACAGGCGGTGCTCAGCTTCC
29 18150CATCAGCATGGACAGCGGCGGCGGG
30 957317GGTGCTGACCACCACCGAAGCACAG

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