GTEXv5 Human Uterus RefSeq (Sep15) RPKM log2 : ENSG00000080644: Display Trait

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Trait Data and Analysis for Record ID ENSG00000080644

Details and Links

Gene Symbol: CHRNA3
Aliases: LNCR2; NACHRA3; PAOD2
Description: cholinergic receptor, 2C nicotinic, 2C alpha 3 (neuronal)
Location: Chr 15 @ 78.593052 Mb on the minus strand
Target Score:
Species and Group: Human, GTEx_v5
Database 3: GTEXv5 Human Uterus RefSeq (Sep15) RPKM log2
Resource Links: Gene OMIM UniGene HomoloGene
BioGPS STRING PANTHER Gemma ABA EBI GWAS Wiki-Pi

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Basic Statistics

Basic Table
Probability Plot
Bar Graph (by name)
Bar Graph (by rank)
Box Plot

Statistic Value
N of Samples 89
Mean 0.257
Median 0.170
Standard Error (SE) 0.026
Standard Deviation (SD) 0.248
Minimum 0.014
Maximum 1.239
Range (log2) 1.225
Range (fold) 2.338
Interquartile Range 1.166

This plot evaluates whether data are normally distributed. Different symbols represent different groups.

More about Normal Probability Plots and more about interpreting these plots from the glossary

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Calculate Correlations

Sample r
Literature r
Tissue r

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Pearson Spearman Rank

The Sample Correlation is computed between trait data and any
other traits in the sample database selected above. Use Spearman Rank
when the sample size is small (<20) or when there are influential outliers.
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The Literature Correlation (Lit r) between this gene and all other genes is computed
using the Semantic Gene Organizer and human, rat, and mouse data from PubMed.
Values are ranked by Lit r, but Sample r and Tissue r are also displayed.

More on using Lit r
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Pearson Spearman Rank

The Tissue Correlation (Tissue r) estimates the similarity of expression of two genes
or transcripts across different cells, tissues, or organs (glossary). Tissue correlations
are generated by analyzing expression in multiple samples usually taken from single cases.
Pearson and Spearman Rank correlations have been computed for all pairs of genes
using data from mouse samples.

Mapping Tools

mappingMethodId 2 has not been implemented for this dataset yet.

Review and Edit Data

Edit or delete values in the Trait Data boxes, and use the Reset option as needed.
  Block samples by index:
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  Outliers highlighted in yellow can be hidden using the Hide Outliers button,
  and samples with no value (x) can be hidden by clicking Hide No Value .

Index Sample Value SE N
1 GTEXv5-1117F ±
2 GTEXv5-111CU ±
3 GTEXv5-111FC ±
4 GTEXv5-111VG ±
5 GTEXv5-111YS ±
6 GTEXv5-1122O ±
7 GTEXv5-1128S ±
8 GTEXv5-113IC ±
9 GTEXv5-113JC ±
10 GTEXv5-117XS ±
11 GTEXv5-117YW ±
12 GTEXv5-117YX ±
13 GTEXv5-1192W ±
14 GTEXv5-1192X ±
15 GTEXv5-11DXW ±
16 GTEXv5-11DXX ±
17 GTEXv5-11DXY ±
18 GTEXv5-11DXZ ±
19 GTEXv5-11DYG ±
20 GTEXv5-11DZ1 ±
21 GTEXv5-11EI6 ±
22 GTEXv5-11EM3 ±
23 GTEXv5-11EMC ±
24 GTEXv5-11EQ8 ±
25 GTEXv5-11EQ9 ±
26 GTEXv5-11GS4 ±
27 GTEXv5-11GSO ±
28 GTEXv5-11GSP ±
29 GTEXv5-11H98 ±
30 GTEXv5-11I78 ±
31 GTEXv5-11ILO ±
32 GTEXv5-11LCK ±
33 GTEXv5-11NSD ±
34 GTEXv5-11NUK ±
35 GTEXv5-11NV4 ±
36 GTEXv5-11O72 ±
37 GTEXv5-11OC5 ±
38 GTEXv5-11OF3 ±
39 GTEXv5-11ONC ±
40 GTEXv5-11P7K ±
41 GTEXv5-11P81 ±
42 GTEXv5-11P82 ±
43 GTEXv5-11PRG ±
44 GTEXv5-11TT1 ±
45 GTEXv5-11TTK ±
46 GTEXv5-11TUW ±
47 GTEXv5-11UD1 ±
48 GTEXv5-11UD2 ±
49 GTEXv5-11VI4 ±
50 GTEXv5-11WQC ±
51 GTEXv5-11WQK ±
52 GTEXv5-11XUK ±
53 GTEXv5-11ZTS ±
54 GTEXv5-11ZTT ±
55 GTEXv5-11ZU8 ±
56 GTEXv5-11ZUS ±
57 GTEXv5-11ZVC ±
58 GTEXv5-1211K ±
59 GTEXv5-12126 ±
60 GTEXv5-1212Z ±
61 GTEXv5-12584 ±
62 GTEXv5-12696 ±
63 GTEXv5-1269C ±
64 GTEXv5-12BJ1 ±
65 GTEXv5-12C56 ±
66 GTEXv5-12KS4 ±
67 GTEXv5-12WS9 ±
68 GTEXv5-12WSA ±
69 GTEXv5-12WSB ±
70 GTEXv5-12WSC ±
71 GTEXv5-12WSD ±
72 GTEXv5-12WSE ±
73 GTEXv5-12WSF ±
74 GTEXv5-12WSG ±
75 GTEXv5-12WSH ±
76 GTEXv5-12WSI ±
77 GTEXv5-12WSJ ±
78 GTEXv5-12WSK ±
79 GTEXv5-12WSL ±
80 GTEXv5-12WSM ±
81 GTEXv5-12WSN ±
82 GTEXv5-12ZZW ±
83 GTEXv5-12ZZX ±
84 GTEXv5-12ZZY ±
85 GTEXv5-12ZZZ ±
86 GTEXv5-13111 ±
87 GTEXv5-13112 ±
88 GTEXv5-13113 ±
89 GTEXv5-1313W ±
90 GTEXv5-1314G ±
91 GTEXv5-131XE ±
92 GTEXv5-131XF ±
93 GTEXv5-131XG ±
94 GTEXv5-131XH ±
95 GTEXv5-131XW ±
96 GTEXv5-131YS ±
97 GTEXv5-132AR ±
98 GTEXv5-132NY ±
99 GTEXv5-132Q8 ±
100 GTEXv5-132QS ±
101 GTEXv5-1339X ±
102 GTEXv5-133LE ±
103 GTEXv5-1399Q ±
104 GTEXv5-1399R ±
105 GTEXv5-1399S ±
106 GTEXv5-1399T ±
107 GTEXv5-1399U ±
108 GTEXv5-139D8 ±
109 GTEXv5-139T4 ±
110 GTEXv5-139T6 ±
111 GTEXv5-139T8 ±
112 GTEXv5-139TS ±
113 GTEXv5-139TT ±
114 GTEXv5-139TU ±
115 GTEXv5-139UC ±
116 GTEXv5-139UW ±
117 GTEXv5-139YR ±
118 GTEXv5-13CF2 ±
119 GTEXv5-13CF3 ±
120 GTEXv5-13CIG ±
121 GTEXv5-13CZU ±
122 GTEXv5-13CZV ±
123 GTEXv5-13D11 ±
124 GTEXv5-13FH7 ±
125 GTEXv5-13FHO ±
126 GTEXv5-13FHP ±
127 GTEXv5-13FLV ±
128 GTEXv5-13FLW ±
129 GTEXv5-13FTW ±
130 GTEXv5-13FTX ±
131 GTEXv5-13FTY ±
132 GTEXv5-13FTZ ±
133 GTEXv5-13FXS ±
134 GTEXv5-13G51 ±
135 GTEXv5-13IVO ±
136 GTEXv5-13JUV ±
137 GTEXv5-13JVG ±
138 GTEXv5-13N11 ±
139 GTEXv5-13N1W ±
140 GTEXv5-13N2G ±
141 GTEXv5-13NYB ±
142 GTEXv5-13NYC ±
143 GTEXv5-13NYS ±
144 GTEXv5-13NZ8 ±
145 GTEXv5-13NZ9 ±
146 GTEXv5-13NZA ±
147 GTEXv5-13NZB ±
148 GTEXv5-13O1R ±
149 GTEXv5-13O21 ±
150 GTEXv5-13O3O ±
151 GTEXv5-13O3P ±
152 GTEXv5-13O3Q ±
153 GTEXv5-13O61 ±
154 GTEXv5-13OVG ±
155 GTEXv5-13OVH ±
156 GTEXv5-13OVI ±
157 GTEXv5-13OVJ ±
158 GTEXv5-13OVK ±
159 GTEXv5-13OVL ±
160 GTEXv5-13OW5 ±
161 GTEXv5-13OW6 ±
162 GTEXv5-13OW7 ±
163 GTEXv5-13OW8 ±
164 GTEXv5-13PDP ±
165 GTEXv5-13PL6 ±
166 GTEXv5-13PL7 ±
167 GTEXv5-13PLJ ±
168 GTEXv5-13PVQ ±
169 GTEXv5-13PVR ±
170 GTEXv5-13QBU ±
171 GTEXv5-13QIC ±
172 GTEXv5-13QJ3 ±
173 GTEXv5-13QJC ±
174 GTEXv5-13RTJ ±
175 GTEXv5-13RTK ±
176 GTEXv5-13RTL ±
177 GTEXv5-13S7M ±
178 GTEXv5-13S86 ±
179 GTEXv5-13SLW ±
180 GTEXv5-13SLX ±
181 GTEXv5-13U4I ±
182 GTEXv5-13VXT ±
183 GTEXv5-13VXU ±
184 GTEXv5-13W3W ±
185 GTEXv5-13W46 ±
186 GTEXv5-13X6H ±
187 GTEXv5-13X6I ±
188 GTEXv5-13X6J ±
189 GTEXv5-13X6K ±
190 GTEXv5-13YAN ±
191 GTEXv5-1445S ±
192 GTEXv5-144FL ±
193 GTEXv5-144GL ±
194 GTEXv5-144GM ±
195 GTEXv5-144GN ±
196 GTEXv5-144GO ±
197 GTEXv5-145LS ±
198 GTEXv5-145LT ±
199 GTEXv5-145LU ±
200 GTEXv5-145LV ±
201 GTEXv5-145ME ±
202 GTEXv5-145MF ±
203 GTEXv5-145MG ±
204 GTEXv5-145MH ±
205 GTEXv5-145MI ±
206 GTEXv5-145MN ±
207 GTEXv5-145MO ±
208 GTEXv5-146FH ±
209 GTEXv5-146FQ ±
210 GTEXv5-146FR ±
211 GTEXv5-14753 ±
212 GTEXv5-1477Z ±
213 GTEXv5-147F3 ±
214 GTEXv5-147F4 ±
215 GTEXv5-147GR ±
216 GTEXv5-147JS ±
217 GTEXv5-148VI ±
218 GTEXv5-148VJ ±
219 GTEXv5-1497J ±
220 GTEXv5-14A5H ±
221 GTEXv5-14A5I ±
222 GTEXv5-14A6H ±
223 GTEXv5-14ABY ±
224 GTEXv5-14AS3 ±
225 GTEXv5-14ASI ±
226 GTEXv5-14B4R ±
227 GTEXv5-14BIL ±
228 GTEXv5-14BIM ±
229 GTEXv5-14BIN ±
230 GTEXv5-14BMU ±
231 GTEXv5-14BMV ±
232 GTEXv5-14C38 ±
233 GTEXv5-14C39 ±
234 GTEXv5-14C5O ±
235 GTEXv5-14DAQ ±
236 GTEXv5-14DAR ±
237 GTEXv5-14E1K ±
238 GTEXv5-14E6C ±
239 GTEXv5-14E6D ±
240 GTEXv5-14E6E ±
241 GTEXv5-14E7W ±
242 GTEXv5-14H4A ±
243 GTEXv5-14ICK ±
244 GTEXv5-14ICL ±
245 GTEXv5-N7MS ±
246 GTEXv5-N7MT ±
247 GTEXv5-NFK9 ±
248 GTEXv5-NL3G ±
249 GTEXv5-NL3H ±
250 GTEXv5-NL4W ±
251 GTEXv5-NPJ7 ±
252 GTEXv5-NPJ8 ±
253 GTEXv5-O5YT ±
254 GTEXv5-O5YU ±
255 GTEXv5-O5YV ±
256 GTEXv5-O5YW ±
257 GTEXv5-OHPJ ±
258 GTEXv5-OHPK ±
259 GTEXv5-OHPL ±
260 GTEXv5-OHPM ±
261 GTEXv5-OHPN ±
262 GTEXv5-OIZF ±
263 GTEXv5-OIZG ±
264 GTEXv5-OIZH ±
265 GTEXv5-OIZI ±
266 GTEXv5-OOBJ ±
267 GTEXv5-OOBK ±
268 GTEXv5-OXRK ±
269 GTEXv5-OXRL ±
270 GTEXv5-OXRN ±
271 GTEXv5-OXRO ±
272 GTEXv5-OXRP ±
273 GTEXv5-P44G ±
274 GTEXv5-P44H ±
275 GTEXv5-P4PP ±
276 GTEXv5-P4PQ ±
277 GTEXv5-P4QR ±
278 GTEXv5-P4QS ±
279 GTEXv5-P4QT ±
280 GTEXv5-P78B ±
281 GTEXv5-PLZ4 ±
282 GTEXv5-PLZ5 ±
283 GTEXv5-PLZ6 ±
284 GTEXv5-POMQ ±
285 GTEXv5-POYW ±
286 GTEXv5-PSDG ±
287 GTEXv5-PVOW ±
288 GTEXv5-PW2O ±
289 GTEXv5-PWCY ±
290 GTEXv5-PWN1 ±
291 GTEXv5-PWO3 ±
292 GTEXv5-PWOO ±
293 GTEXv5-PX3G ±
294 GTEXv5-Q2AG ±
295 GTEXv5-Q2AH ±
296 GTEXv5-Q2AI ±
297 GTEXv5-Q734 ±
298 GTEXv5-QCQG ±
299 GTEXv5-QDT8 ±
300 GTEXv5-QDVJ ±
301 GTEXv5-QDVN ±
302 GTEXv5-QEG4 ±
303 GTEXv5-QEG5 ±
304 GTEXv5-QEL4 ±
305 GTEXv5-QESD ±
306 GTEXv5-QLQ7 ±
307 GTEXv5-QLQW ±
308 GTEXv5-QMR6 ±
309 GTEXv5-QMRM ±
310 GTEXv5-QV31 ±
311 GTEXv5-QV44 ±
312 GTEXv5-QVJO ±
313 GTEXv5-QVUS ±
314 GTEXv5-QXCU ±
315 GTEXv5-R3RS ±
316 GTEXv5-R45C ±
317 GTEXv5-R53T ±
318 GTEXv5-R55C ±
319 GTEXv5-R55D ±
320 GTEXv5-R55E ±
321 GTEXv5-R55F ±
322 GTEXv5-R55G ±
323 GTEXv5-REY6 ±
324 GTEXv5-RM2N ±
325 GTEXv5-RN64 ±
326 GTEXv5-RNOR ±
327 GTEXv5-RTLS ±
328 GTEXv5-RU1J ±
329 GTEXv5-RU72 ±
330 GTEXv5-RUSQ ±
331 GTEXv5-RVPU ±
332 GTEXv5-RVPV ±
333 GTEXv5-RWS6 ±
334 GTEXv5-RWSA ±
335 GTEXv5-S32W ±
336 GTEXv5-S33H ±
337 GTEXv5-S341 ±
338 GTEXv5-S3XE ±
339 GTEXv5-S4P3 ±
340 GTEXv5-S4Q7 ±
341 GTEXv5-S4UY ±
342 GTEXv5-S4Z8 ±
343 GTEXv5-S7PM ±
344 GTEXv5-S7SE ±
345 GTEXv5-S7SF ±
346 GTEXv5-S95S ±
347 GTEXv5-SE5C ±
348 GTEXv5-SIU7 ±
349 GTEXv5-SIU8 ±
350 GTEXv5-SJXC ±
351 GTEXv5-SN8G ±
352 GTEXv5-SNMC ±
353 GTEXv5-SNOS ±
354 GTEXv5-SSA3 ±
355 GTEXv5-SUCS ±
356 GTEXv5-T2IS ±
357 GTEXv5-T2YK ±
358 GTEXv5-T5JC ±
359 GTEXv5-T5JW ±
360 GTEXv5-T6MN ±
361 GTEXv5-T6MO ±
362 GTEXv5-T8EM ±
363 GTEXv5-TKQ1 ±
364 GTEXv5-TKQ2 ±
365 GTEXv5-TMKS ±
366 GTEXv5-TML8 ±
367 GTEXv5-TMMY ±
368 GTEXv5-TMZS ±
369 GTEXv5-TSE9 ±
370 GTEXv5-U3ZG ±
371 GTEXv5-U3ZH ±
372 GTEXv5-U3ZM ±
373 GTEXv5-U3ZN ±
374 GTEXv5-U412 ±
375 GTEXv5-U4B1 ±
376 GTEXv5-U8T8 ±
377 GTEXv5-U8XE ±
378 GTEXv5-UJHI ±
379 GTEXv5-UJMC ±
380 GTEXv5-UPIC ±
381 GTEXv5-UPJH ±
382 GTEXv5-UPK5 ±
383 GTEXv5-UTHO ±
384 GTEXv5-V1D1 ±
385 GTEXv5-V955 ±
386 GTEXv5-VJWN ±
387 GTEXv5-VJYA ±
388 GTEXv5-VUSG ±
389 GTEXv5-VUSH ±
390 GTEXv5-W5WG ±
391 GTEXv5-W5X1 ±
392 GTEXv5-WCDI ±
393 GTEXv5-WEY5 ±
394 GTEXv5-WFG7 ±
395 GTEXv5-WFG8 ±
396 GTEXv5-WFJO ±
397 GTEXv5-WFON ±
398 GTEXv5-WH7G ±
399 GTEXv5-WHPG ±
400 GTEXv5-WHSB ±
401 GTEXv5-WHSE ±
402 GTEXv5-WHWD ±
403 GTEXv5-WI4N ±
404 GTEXv5-WK11 ±
405 GTEXv5-WL46 ±
406 GTEXv5-WOFL ±
407 GTEXv5-WOFM ±
408 GTEXv5-WQUQ ±
409 GTEXv5-WRHK ±
410 GTEXv5-WRHU ±
411 GTEXv5-WVJS ±
412 GTEXv5-WVLH ±
413 GTEXv5-WWTW ±
414 GTEXv5-WWYW ±
415 GTEXv5-WXYG ±
416 GTEXv5-WY7C ±
417 GTEXv5-WYBS ±
418 GTEXv5-WYJK ±
419 GTEXv5-WYVS ±
420 GTEXv5-WZTO ±
421 GTEXv5-X15G ±
422 GTEXv5-X261 ±
423 GTEXv5-X3Y1 ±
424 GTEXv5-X4EO ±
425 GTEXv5-X4EP ±
426 GTEXv5-X4LF ±
427 GTEXv5-X4XX ±
428 GTEXv5-X4XY ±
429 GTEXv5-X585 ±
430 GTEXv5-X5EB ±
431 GTEXv5-X62O ±
432 GTEXv5-X638 ±
433 GTEXv5-X88G ±
434 GTEXv5-X8HC ±
435 GTEXv5-XAJ8 ±
436 GTEXv5-XBEC ±
437 GTEXv5-XBED ±
438 GTEXv5-XBEW ±
439 GTEXv5-XGQ4 ±
440 GTEXv5-XK95 ±
441 GTEXv5-XLM4 ±
442 GTEXv5-XMD1 ±
443 GTEXv5-XMD2 ±
444 GTEXv5-XMD3 ±
445 GTEXv5-XMK1 ±
446 GTEXv5-XOT4 ±
447 GTEXv5-XOTO ±
448 GTEXv5-XPT6 ±
449 GTEXv5-XPVG ±
450 GTEXv5-XQ3S ±
451 GTEXv5-XQ8I ±
452 GTEXv5-XUJ4 ±
453 GTEXv5-XUW1 ±
454 GTEXv5-XUYS ±
455 GTEXv5-XUZC ±
456 GTEXv5-XV7Q ±
457 GTEXv5-XXEK ±
458 GTEXv5-XYKS ±
459 GTEXv5-Y111 ±
460 GTEXv5-Y114 ±
461 GTEXv5-Y3I4 ±
462 GTEXv5-Y3IK ±
463 GTEXv5-Y5LM ±
464 GTEXv5-Y5V5 ±
465 GTEXv5-Y5V6 ±
466 GTEXv5-Y8DK ±
467 GTEXv5-Y8E4 ±
468 GTEXv5-Y8E5 ±
469 GTEXv5-Y8LW ±
470 GTEXv5-Y9LG ±
471 GTEXv5-YB5E ±
472 GTEXv5-YB5K ±
473 GTEXv5-YBZK ±
474 GTEXv5-YEC3 ±
475 GTEXv5-YEC4 ±
476 GTEXv5-YECK ±
477 GTEXv5-YF7O ±
478 GTEXv5-YFC4 ±
479 GTEXv5-YFCO ±
480 GTEXv5-YJ89 ±
481 GTEXv5-YJ8A ±
482 GTEXv5-YJ8O ±
483 GTEXv5-Z93S ±
484 GTEXv5-Z93T ±
485 GTEXv5-Z9EW ±
486 GTEXv5-ZA64 ±
487 GTEXv5-ZAB4 ±
488 GTEXv5-ZAB5 ±
489 GTEXv5-ZAJG ±
490 GTEXv5-ZAK1 ±
491 GTEXv5-ZAKK ±
492 GTEXv5-ZC5H ±
493 GTEXv5-ZDTS ±
494 GTEXv5-ZDTT ±
495 GTEXv5-ZDXO ±
496 GTEXv5-ZDYS ±
497 GTEXv5-ZE7O ±
498 GTEXv5-ZE9C ±
499 GTEXv5-ZEX8 ±
500 GTEXv5-ZF28 ±
501 GTEXv5-ZF29 ±
502 GTEXv5-ZF2S ±
503 GTEXv5-ZF3C ±
504 GTEXv5-ZG7Y ±
505 GTEXv5-ZGAY ±
506 GTEXv5-ZLFU ±
507 GTEXv5-ZLV1 ±
508 GTEXv5-ZLWG ±
509 GTEXv5-ZP4G ±
510 GTEXv5-ZPCL ±
511 GTEXv5-ZPIC ±
512 GTEXv5-ZPU1 ±
513 GTEXv5-ZQG8 ±
514 GTEXv5-ZQUD ±
515 GTEXv5-ZT9W ±
516 GTEXv5-ZT9X ±
517 GTEXv5-ZTPG ±
518 GTEXv5-ZTSS ±
519 GTEXv5-ZTTD ±
520 GTEXv5-ZTX8 ±
521 GTEXv5-ZU9S ±
522 GTEXv5-ZUA1 ±
523 GTEXv5-ZV68 ±
524 GTEXv5-ZV6S ±
525 GTEXv5-ZV7C ±
526 GTEXv5-ZVE1 ±
527 GTEXv5-ZVE2 ±
528 GTEXv5-ZVP2 ±
529 GTEXv5-ZVT2 ±
530 GTEXv5-ZVT3 ±
531 GTEXv5-ZVT4 ±
532 GTEXv5-ZVTK ±
533 GTEXv5-ZVZO ±
534 GTEXv5-ZVZP ±
535 GTEXv5-ZVZQ ±
536 GTEXv5-ZWKS ±
537 GTEXv5-ZXES ±
538 GTEXv5-ZXG5 ±
539 GTEXv5-ZY6K ±
540 GTEXv5-ZYFC ±
541 GTEXv5-ZYFD ±
542 GTEXv5-ZYFG ±
543 GTEXv5-ZYT6 ±
544 GTEXv5-ZYVF ±
545 GTEXv5-ZYW4 ±
546 GTEXv5-ZYWO ±
547 GTEXv5-ZYY3 ±
548 GTEXv5-ZZ64 ±
549 GTEXv5-ZZPT ±
550 GTEXv5-ZZPU ±

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