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Trait Data and Analysis  for Record ID ENSG00000080644.10

  Details and Links

Gene Symbol: CHRNA3
Aliases: LNCR2; NACHRA3; PAOD2
Description: cholinergic receptor, nicotinic, alpha 3 (neuronal)
Location: Chr 15 @ 78.887647 Mb on the minus strand
Target Score:
Species and Group: Human, GTEx
Database 3: GTEx Human Blood, Cells - EBV-Transformed Lymphocytes (Apr14) RPKM
Resource Links: Gene  OMIM  UniGene  HomoloGene  
BioGPS  STRING  PANTHER  Gemma  ABA  EBI GWAS  Wiki-Pi  

Add To Collection Find similar expression data  Check probe locations at UCSC  Write or review comments about this gene
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  Basic Statistics



Fewer than 4 case data were entered. No statistical analysis has been attempted.

  Calculate Correlations

Database:
Return:

Pearson    Spearman Rank



The Sample Correlation is computed between trait data and any
other traits in the sample database selected above. Use Spearman Rank
when the sample size is small (<20) or when there are influential outliers.
Database:
Return:



The Literature Correlation (Lit r) between this gene and all other genes is computed
using the Semantic Gene Organizer and human, rat, and mouse data from PubMed.
Values are ranked by Lit r, but Sample r and Tissue r are also displayed.

More on using Lit r
Database:
Return:

Pearson    Spearman Rank



The Tissue Correlation (Tissue r) estimates the similarity of expression of two genes
or transcripts across different cells, tissues, or organs (glossary). Tissue correlations
are generated by analyzing expression in multiple samples usually taken from single cases.
Pearson and Spearman Rank correlations have been computed for all pairs of genes
using data from mouse samples.

  Mapping Tools

mappingMethodId 2 has not been implemented for this dataset yet.

  Review and Edit Data

Edit or delete values in the Trait Data boxes, and use the Reset option as needed.

  Block samples by index:        
  Options:                       


  Outliers highlighted in  yellow  can be hidden using the Hide Outliers button,
  and samples with no value (x) can be hidden by clicking Hide No Value .


IndexSampleValue
1 GTEX-N7MS
2 GTEX-N7MT
3 GTEX-NFK9
4 GTEX-NL3H
5 GTEX-NL4W
6 GTEX-NPJ7
7 GTEX-NPJ8
8 GTEX-O5YT
9 GTEX-O5YV
10 GTEX-O5YW
11 GTEX-OHPJ
12 GTEX-OHPK
13 GTEX-OHPL
14 GTEX-OHPM
15 GTEX-OHPN
16 GTEX-OIZF
17 GTEX-OIZG
18 GTEX-OIZH
19 GTEX-OIZI
20 GTEX-OOBJ
21 GTEX-OOBK
22 GTEX-OXRK
23 GTEX-OXRL
24 GTEX-OXRN
25 GTEX-OXRO
26 GTEX-OXRP
27 GTEX-P44G
28 GTEX-P44H
29 GTEX-P4PP
30 GTEX-P4PQ
31 GTEX-P4QR
32 GTEX-P4QS
33 GTEX-P4QT
34 GTEX-P78B
35 GTEX-PLZ4
36 GTEX-PLZ5
37 GTEX-PLZ6
38 GTEX-POMQ
39 GTEX-POYW
40 GTEX-PSDG
41 GTEX-PVOW
42 GTEX-PW2O
43 GTEX-PWCY
44 GTEX-PWN1
45 GTEX-PWO3
46 GTEX-PWOO
47 GTEX-PX3G
48 GTEX-Q2AG
49 GTEX-Q2AH
50 GTEX-Q2AI
51 GTEX-Q734
52 GTEX-QCQG
53 GTEX-QDT8
54 GTEX-QDVJ
55 GTEX-QDVN
56 GTEX-QEG4
57 GTEX-QEG5
58 GTEX-QEL4
59 GTEX-QESD
60 GTEX-QLQ7
61 GTEX-QLQW
62 GTEX-QMR6
63 GTEX-QMRM
64 GTEX-QV31
65 GTEX-QV44
66 GTEX-QVJO
67 GTEX-QVUS
68 GTEX-QXCU
69 GTEX-R3RS
70 GTEX-R45C
71 GTEX-R53T
72 GTEX-R55C
73 GTEX-R55D
74 GTEX-R55E
75 GTEX-R55F
76 GTEX-R55G
77 GTEX-REY6
78 GTEX-RM2N
79 GTEX-RN64
80 GTEX-RNOR
81 GTEX-RTLS
82 GTEX-RU1J
83 GTEX-RU72
84 GTEX-RUSQ
85 GTEX-RVPU
86 GTEX-RVPV
87 GTEX-RWS6
88 GTEX-RWSA
89 GTEX-S32W
90 GTEX-S33H
91 GTEX-S341
92 GTEX-S3XE
93 GTEX-S4P3
94 GTEX-S4Q7
95 GTEX-S4UY
96 GTEX-S4Z8
97 GTEX-S7PM
98 GTEX-S7SE
99 GTEX-S7SF
100 GTEX-S95S
101 GTEX-SE5C
102 GTEX-SIU7
103 GTEX-SIU8
104 GTEX-SJXC
105 GTEX-SN8G
106 GTEX-SNMC
107 GTEX-SNOS
108 GTEX-SSA3
109 GTEX-SUCS
110 GTEX-T2IS
111 GTEX-T2YK
112 GTEX-T5JC
113 GTEX-T5JW
114 GTEX-T6MN
115 GTEX-T6MO
116 GTEX-T8EM
117 GTEX-TKQ1
118 GTEX-TKQ2
119 GTEX-TMKS
120 GTEX-TML8
121 GTEX-TMMY
122 GTEX-TMZS
123 GTEX-TSE9
124 GTEX-U3ZH
125 GTEX-U3ZM
126 GTEX-U3ZN
127 GTEX-U412
128 GTEX-U4B1
129 GTEX-U8T8
130 GTEX-U8XE
131 GTEX-UJHI
132 GTEX-UJMC
133 GTEX-UPIC
134 GTEX-UPJH
135 GTEX-UPK5
136 GTEX-UTHO
137 GTEX-V1D1
138 GTEX-V955
139 GTEX-VJWN
140 GTEX-VJYA
141 GTEX-VUSG
142 GTEX-VUSH
143 GTEX-W5WG
144 GTEX-W5X1
145 GTEX-WCDI
146 GTEX-WEY5
147 GTEX-WFG7
148 GTEX-WFG8
149 GTEX-WFJO
150 GTEX-WFON
151 GTEX-WH7G
152 GTEX-WHPG
153 GTEX-WHSB
154 GTEX-WHSE
155 GTEX-WHWD
156 GTEX-WI4N
157 GTEX-WK11
158 GTEX-WL46
159 GTEX-WOFL
160 GTEX-WOFM
161 GTEX-WQUQ
162 GTEX-WRHK
163 GTEX-WRHU
164 GTEX-WVLH
165 GTEX-WWYW
166 GTEX-WXYG
167 GTEX-WY7C
168 GTEX-WYBS
169 GTEX-WYJK
170 GTEX-WYVS
171 GTEX-WZTO
172 GTEX-X15G
173 GTEX-X261
174 GTEX-X3Y1
175 GTEX-X4EO
176 GTEX-X4EP
177 GTEX-X4LF
178 GTEX-X4XX
179 GTEX-X4XY
180 GTEX-X585
181 GTEX-X5EB
182 GTEX-X62O
183 GTEX-X8HC
184 GTEX-XAJ8
185 GTEX-XBED

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