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Trait Data and Analysis  for Record ID 10023806278

  Details and Links

Gene Symbol: CHRNA3
Aliases: CHRNA3; LNCR2; NACHRA3; PAOD2
Description: cholinergic receptor, nicotinic, alpha 3
Location: Chr 15 @ 78.887646 Mb
Target Score:
Species and Group: Human, HB
Database 3: HBTRC-MLC Human Prefrontal Cortex Agilent Normal (Jun11) mlratio
Resource Links: Gene  OMIM  GenBank  HomoloGene  
BioGPS  STRING  PANTHER  Gemma  ABA  EBI GWAS  Wiki-Pi  

Add To Collection Find similar expression data  Check probe locations at UCSC  Write or review comments about this gene
AddFindVerifyGeneWiki

  Basic Statistics



StatisticValue
N of Samples165
Mean0.005
Median0.006
Standard Error (SE)0.004
Standard Deviation (SD)0.052
Minimum-0.176
Maximum0.191
Range (log2)0.367
Range (fold)1.290
Interquartile Range1.041

nP_RP0ZQoLZ.gif


This plot evaluates whether data are normally distributed. Different symbols represent different groups.

More about Normal Probability Plots and more about interpreting these plots from the glossary

Box_LsaK29BW.gif

More about Box Plots

Bar_M8RfS64K.gif

Bar_F5SByBRb.gif

  Calculate Correlations

Database:
Return:

Pearson    Spearman Rank



The Sample Correlation is computed between trait data and any
other traits in the sample database selected above. Use Spearman Rank
when the sample size is small (<20) or when there are influential outliers.
Database:
Return:



The Literature Correlation (Lit r) between this gene and all other genes is computed
using the Semantic Gene Organizer and human, rat, and mouse data from PubMed.
Values are ranked by Lit r, but Sample r and Tissue r are also displayed.

More on using Lit r
Database:
Return:

Pearson    Spearman Rank



The Tissue Correlation (Tissue r) estimates the similarity of expression of two genes
or transcripts across different cells, tissues, or organs (glossary). Tissue correlations
are generated by analyzing expression in multiple samples usually taken from single cases.
Pearson and Spearman Rank correlations have been computed for all pairs of genes
using data from mouse samples.

  Mapping Tools

Mapping options are disabled for data not matched with genotypes.

  Review and Edit Data

Edit or delete values in the Trait Data boxes, and use the Reset option as needed.

  Block samples by index:        
  Options:                       


  Outliers highlighted in  yellow  can be hidden using the Hide Outliers button,
  and samples with no value (x) can be hidden by clicking Hide No Value .


IndexSampleValue
1 HB_023_N
2 HB_026_N
3 HB_029_N
4 HB_030_N
5 HB_058_N
6 HB_064_N
7 HB_083_N
8 HB_086_N
9 HB_091_N
10 HB_092_N
11 HB_102_N
12 HB_119_N
13 HB_143_N
14 HB_144_N
15 HB_147_N
16 HB_161_N
17 HB_162_N
18 HB_166_N
19 HB_183_N
20 HB_206_N
21 HB_215_N
22 HB_218_N
23 HB_220_N
24 HB_223_N
25 HB_226_N
26 HB_227_N
27 HB_241_N
28 HB_243_N
29 HB_247_N
30 HB_257_N
31 HB_264_N
32 HB_269_N
33 HB_293_N
34 HB_295_N
35 HB_300_N
36 HB_311_N
37 HB_324_N
38 HB_332_N
39 HB_340_N
40 HB_346_N
41 HB_350_N
42 HB_360_N
43 HB_365_N
44 HB_367_N
45 HB_379_N
46 HB_382_N
47 HB_396_N
48 HB_398_N
49 HB_400_N
50 HB_403_N
51 HB_414_N
52 HB_416_N
53 HB_418_N
54 HB_421_N
55 HB_423_N
56 HB_425_N
57 HB_426_N
58 HB_427_N
59 HB_431_N
60 HB_432_N
61 HB_433_N
62 HB_436_N
63 HB_440_N
64 HB_443_N
65 HB_446_N
66 HB_447_N
67 HB_449_N
68 HB_450_N
69 HB_452_N
70 HB_453_N
71 HB_458_N
72 HB_462_N
73 HB_463_N
74 HB_464_N
75 HB_468_N
76 HB_472_N
77 HB_475_N
78 HB_476_N
79 HB_480_N
80 HB_485_N
81 HB_486_N
82 HB_495_N
83 HB_497_N
84 HB_500_N
85 HB_501_N
86 HB_504_N
87 HB_505_N
88 HB_507_N
89 HB_508_N
90 HB_509_N
91 HB_512_N
92 HB_516_N
93 HB_519_N
94 HB_532_N
95 HB_540_N
96 HB_541_N
97 HB_542_N
98 HB_544_N
99 HB_547_N
100 HB_551_N
101 HB_557_N
102 HB_560_N
103 HB_563_N
104 HB_569_N
105 HB_570_N
106 HB_572_N
107 HB_577_N
108 HB_579_N
109 HB_580_N
110 HB_581_N
111 HB_584_N
112 HB_586_N
113 HB_587_N
114 HB_589_N
115 HB_595_N
116 HB_601_N
117 HB_604_N
118 HB_609_N
119 HB_614_N
120 HB_618_N
121 HB_622_N
122 HB_625_N
123 HB_628_N
124 HB_631_N
125 HB_637_N
126 HB_638_N
127 HB_640_N
128 HB_641_N
129 HB_643_N
130 HB_644_N
131 HB_645_N
132 HB_648_N
133 HB_650_N
134 HB_651_N
135 HB_653_N
136 HB_658_N
137 HB_659_N
138 HB_660_N
139 HB_662_N
140 HB_663_N
141 HB_670_N
142 HB_675_N
143 HB_676_N
144 HB_677_N
145 HB_679_N
146 HB_687_N
147 HB_689_N
148 HB_694_N
149 HB_697_N
150 HB_700_N
151 HB_701_N
152 HB_711_N
153 HB_714_N
154 HB_717_N
155 HB_721_N
156 HB_726_N
157 HB_730_N
158 HB_735_N
159 HB_737_N
160 HB_738_N
161 HB_747_N
162 HB_759_N
163 HB_764_N
164 HB_765_N
165 HB_767_N
166 HB_770_N
167 HB_772_N
168 HB_040_AD
169 HB_045_AD
170 HB_048_AD
171 HB_053_AD
172 HB_055_AD
173 HB_068_AD
174 HB_082_AD
175 HB_085_AD
176 HB_087_AD
177 HB_088_AD
178 HB_089_AD
179 HB_093_AD
180 HB_095_AD
181 HB_096_AD
182 HB_097_AD
183 HB_099_AD
184 HB_100_AD
185 HB_103_AD
186 HB_104_AD
187 HB_111_AD
188 HB_112_AD
189 HB_113_AD
190 HB_114_AD
191 HB_116_AD
192 HB_117_AD
193 HB_118_AD
194 HB_120_AD
195 HB_122_AD
196 HB_123_AD
197 HB_124_AD
198 HB_125_AD
199 HB_126_AD
200 HB_127_AD
201 HB_128_AD
202 HB_130_AD
203 HB_131_AD
204 HB_132_AD
205 HB_134_AD
206 HB_135_AD
207 HB_136_AD
208 HB_137_AD
209 HB_138_AD
210 HB_140_AD
211 HB_146_AD
212 HB_148_AD
213 HB_149_AD
214 HB_150_AD
215 HB_151_AD
216 HB_154_AD
217 HB_155_AD
218 HB_156_AD
219 HB_157_AD
220 HB_158_AD
221 HB_160_AD
222 HB_163_AD
223 HB_164_AD
224 HB_165_AD
225 HB_167_AD
226 HB_168_AD
227 HB_169_AD
228 HB_170_AD
229 HB_171_AD
230 HB_174_AD
231 HB_176_AD
232 HB_178_AD
233 HB_179_AD
234 HB_181_AD
235 HB_184_AD
236 HB_190_AD
237 HB_193_AD
238 HB_194_AD
239 HB_195_AD
240 HB_197_AD
241 HB_198_AD
242 HB_199_AD
243 HB_200_AD
244 HB_201_AD
245 HB_204_AD
246 HB_205_AD
247 HB_208_AD
248 HB_209_AD
249 HB_211_AD
250 HB_212_AD
251 HB_216_AD
252 HB_217_AD
253 HB_219_AD
254 HB_221_AD
255 HB_222_AD
256 HB_224_AD
257 HB_229_AD
258 HB_230_AD
259 HB_231_AD
260 HB_232_AD
261 HB_234_AD
262 HB_236_AD
263 HB_237_AD
264 HB_238_AD
265 HB_240_AD
266 HB_244_AD
267 HB_245_AD
268 HB_246_AD
269 HB_250_AD
270 HB_251_AD
271 HB_252_AD
272 HB_253_AD
273 HB_258_AD
274 HB_259_AD
275 HB_260_AD
276 HB_262_AD
277 HB_263_AD
278 HB_265_AD
279 HB_267_AD
280 HB_268_AD
281 HB_273_AD
282 HB_274_AD
283 HB_275_AD
284 HB_276_AD
285 HB_277_AD
286 HB_278_AD
287 HB_280_AD
288 HB_281_AD
289 HB_283_AD
290 HB_284_AD
291 HB_285_AD
292 HB_286_AD
293 HB_287_AD
294 HB_288_AD
295 HB_289_AD
296 HB_290_AD
297 HB_292_AD
298 HB_296_AD
299 HB_298_AD
300 HB_299_AD
301 HB_302_AD
302 HB_303_AD
303 HB_305_AD
304 HB_306_AD
305 HB_307_AD
306 HB_308_AD
307 HB_309_AD
308 HB_310_AD
309 HB_312_AD
310 HB_313_AD
311 HB_314_AD
312 HB_315_AD
313 HB_316_AD
314 HB_317_AD
315 HB_318_AD
316 HB_319_AD
317 HB_320_AD
318 HB_322_AD
319 HB_325_AD
320 HB_328_AD
321 HB_330_AD
322 HB_331_AD
323 HB_333_AD
324 HB_334_AD
325 HB_335_AD
326 HB_337_AD
327 HB_338_AD
328 HB_342_AD
329 HB_343_AD
330 HB_345_AD
331 HB_347_AD
332 HB_349_AD
333 HB_352_AD
334 HB_353_AD
335 HB_354_AD
336 HB_356_AD
337 HB_357_AD
338 HB_358_AD
339 HB_359_AD
340 HB_362_AD
341 HB_363_AD
342 HB_364_AD
343 HB_369_AD
344 HB_372_AD
345 HB_373_AD
346 HB_374_AD
347 HB_375_AD
348 HB_376_AD
349 HB_377_AD
350 HB_378_AD
351 HB_380_AD
352 HB_383_AD
353 HB_386_AD
354 HB_388_AD
355 HB_389_AD
356 HB_391_AD
357 HB_392_AD
358 HB_394_AD
359 HB_395_AD
360 HB_397_AD
361 HB_399_AD
362 HB_401_AD
363 HB_404_AD
364 HB_406_AD
365 HB_409_AD
366 HB_410_AD
367 HB_411_AD
368 HB_412_AD
369 HB_413_AD
370 HB_419_AD
371 HB_420_AD
372 HB_422_AD
373 HB_428_AD
374 HB_429_AD
375 HB_430_AD
376 HB_434_AD
377 HB_435_AD
378 HB_437_AD
379 HB_438_AD
380 HB_439_AD
381 HB_441_AD
382 HB_442_AD
383 HB_445_AD
384 HB_448_AD
385 HB_451_AD
386 HB_454_AD
387 HB_455_AD
388 HB_456_AD
389 HB_459_AD
390 HB_460_AD
391 HB_461_AD
392 HB_465_AD
393 HB_469_AD
394 HB_471_AD
395 HB_473_AD
396 HB_474_AD
397 HB_477_AD
398 HB_479_AD
399 HB_481_AD
400 HB_482_AD
401 HB_483_AD
402 HB_484_AD
403 HB_488_AD
404 HB_489_AD
405 HB_490_AD
406 HB_491_AD
407 HB_492_AD
408 HB_493_AD
409 HB_494_AD
410 HB_496_AD
411 HB_498_AD
412 HB_499_AD
413 HB_502_AD
414 HB_503_AD
415 HB_506_AD
416 HB_510_AD
417 HB_514_AD
418 HB_517_AD
419 HB_520_AD
420 HB_521_AD
421 HB_523_AD
422 HB_524_AD
423 HB_525_AD
424 HB_526_AD
425 HB_529_AD
426 HB_531_AD
427 HB_533_AD
428 HB_534_AD
429 HB_535_AD
430 HB_536_AD
431 HB_538_AD
432 HB_539_AD
433 HB_543_AD
434 HB_545_AD
435 HB_546_AD
436 HB_548_AD
437 HB_550_AD
438 HB_552_AD
439 HB_553_AD
440 HB_554_AD
441 HB_555_AD
442 HB_556_AD
443 HB_558_AD
444 HB_559_AD
445 HB_561_AD
446 HB_562_AD
447 HB_564_AD
448 HB_565_AD
449 HB_566_AD
450 HB_567_AD
451 HB_568_AD
452 HB_571_AD
453 HB_573_AD
454 HB_574_AD
455 HB_575_AD
456 HB_576_AD
457 HB_582_AD
458 HB_583_AD
459 HB_585_AD
460 HB_588_AD
461 HB_590_AD
462 HB_591_AD
463 HB_592_AD
464 HB_594_AD
465 HB_596_AD
466 HB_597_AD
467 HB_598_AD
468 HB_599_AD
469 HB_600_AD
470 HB_602_AD
471 HB_603_AD
472 HB_605_AD
473 HB_606_AD
474 HB_607_AD
475 HB_608_AD
476 HB_611_AD
477 HB_612_AD
478 HB_613_AD
479 HB_615_AD
480 HB_619_AD
481 HB_620_AD
482 HB_621_AD
483 HB_623_AD
484 HB_624_AD
485 HB_627_AD
486 HB_629_AD
487 HB_630_AD
488 HB_632_AD
489 HB_633_AD
490 HB_634_AD
491 HB_635_AD
492 HB_636_AD
493 HB_642_AD
494 HB_646_AD
495 HB_647_AD
496 HB_652_AD
497 HB_654_AD
498 HB_655_AD
499 HB_656_AD
500 HB_657_AD
501 HB_664_AD
502 HB_665_AD
503 HB_666_AD
504 HB_668_AD
505 HB_669_AD
506 HB_672_AD
507 HB_673_AD
508 HB_674_AD
509 HB_678_AD
510 HB_680_AD
511 HB_684_AD
512 HB_685_AD
513 HB_686_AD
514 HB_688_AD
515 HB_690_AD
516 HB_693_AD
517 HB_695_AD
518 HB_696_AD
519 HB_698_AD
520 HB_699_AD
521 HB_702_AD
522 HB_703_AD
523 HB_704_AD
524 HB_705_AD
525 HB_706_AD
526 HB_708_AD
527 HB_710_AD
528 HB_712_AD
529 HB_713_AD
530 HB_715_AD
531 HB_718_AD
532 HB_719_AD
533 HB_720_AD
534 HB_722_AD
535 HB_723_AD
536 HB_724_AD
537 HB_727_AD
538 HB_728_AD
539 HB_729_AD
540 HB_731_AD
541 HB_733_AD
542 HB_736_AD
543 HB_739_AD
544 HB_740_AD
545 HB_741_AD
546 HB_742_AD
547 HB_743_AD
548 HB_745_AD
549 HB_746_AD
550 HB_749_AD
551 HB_751_AD
552 HB_752_AD
553 HB_753_AD
554 HB_754_AD
555 HB_755_AD
556 HB_756_AD
557 HB_757_AD
558 HB_761_AD
559 HB_763_AD
560 HB_773_AD
561 HB_775_AD
562 HB_776_AD
563 HB_777_AD
564 HB_779_AD
565 HB_781_AD
566 HB_782_AD
567 HB_783_AD
568 HB_784_AD
569 HB_785_AD
570 HB_786_AD
571 HB_787_AD
572 HB_788_AD
573 HB_789_AD
574 HB_791_AD
575 HB_792_AD
576 HB_793_AD
577 HB_794_AD
578 HB_795_AD
579 HB_796_AD
580 HB_797_AD
581 HB_798_AD
582 HB_799_AD
583 HB_801_AD
584 HB_803_AD
585 HB_001_HD
586 HB_002_HD
587 HB_003_HD
588 HB_004_HD
589 HB_005_HD
590 HB_006_HD
591 HB_007_HD
592 HB_008_HD
593 HB_009_HD
594 HB_010_HD
595 HB_011_HD
596 HB_012_HD
597 HB_013_HD
598 HB_014_HD
599 HB_015_HD
600 HB_016_HD
601 HB_017_HD
602 HB_018_HD
603 HB_019_HD
604 HB_020_HD
605 HB_021_HD
606 HB_022_HD
607 HB_024_HD
608 HB_025_HD
609 HB_027_HD
610 HB_028_HD
611 HB_031_HD
612 HB_032_HD
613 HB_033_HD
614 HB_034_HD
615 HB_035_HD
616 HB_036_HD
617 HB_037_HD
618 HB_038_HD
619 HB_039_HD
620 HB_041_HD
621 HB_042_HD
622 HB_043_HD
623 HB_044_HD
624 HB_046_HD
625 HB_047_HD
626 HB_049_HD
627 HB_050_HD
628 HB_051_HD
629 HB_052_HD
630 HB_054_HD
631 HB_056_HD
632 HB_057_HD
633 HB_059_HD
634 HB_060_HD
635 HB_061_HD
636 HB_062_HD
637 HB_063_HD
638 HB_065_HD
639 HB_066_HD
640 HB_067_HD
641 HB_069_HD
642 HB_070_HD
643 HB_071_HD
644 HB_072_HD
645 HB_073_HD
646 HB_074_HD
647 HB_075_HD
648 HB_076_HD
649 HB_077_HD
650 HB_078_HD
651 HB_079_HD
652 HB_080_HD
653 HB_081_HD
654 HB_084_HD
655 HB_090_HD
656 HB_094_HD
657 HB_098_HD
658 HB_101_HD
659 HB_105_HD
660 HB_106_HD
661 HB_107_HD
662 HB_108_HD
663 HB_109_HD
664 HB_110_HD
665 HB_115_HD
666 HB_121_HD
667 HB_129_HD
668 HB_133_HD
669 HB_139_HD
670 HB_141_HD
671 HB_142_HD
672 HB_145_HD
673 HB_152_HD
674 HB_153_HD
675 HB_159_HD
676 HB_172_HD
677 HB_173_HD
678 HB_175_HD
679 HB_177_HD
680 HB_180_HD
681 HB_182_HD
682 HB_185_HD
683 HB_186_HD
684 HB_187_HD
685 HB_188_HD
686 HB_189_HD
687 HB_191_HD
688 HB_192_HD
689 HB_196_HD
690 HB_202_HD
691 HB_203_HD
692 HB_207_HD
693 HB_210_HD
694 HB_213_HD
695 HB_214_HD
696 HB_225_HD
697 HB_228_HD
698 HB_233_HD
699 HB_235_HD
700 HB_239_HD
701 HB_242_HD
702 HB_248_HD
703 HB_249_HD
704 HB_254_HD
705 HB_255_HD
706 HB_256_HD
707 HB_261_HD
708 HB_266_HD
709 HB_270_HD
710 HB_271_HD
711 HB_272_HD
712 HB_279_HD
713 HB_282_HD
714 HB_291_HD
715 HB_294_HD
716 HB_297_HD
717 HB_301_HD
718 HB_304_HD
719 HB_321_HD
720 HB_323_HD
721 HB_326_HD
722 HB_327_HD
723 HB_329_HD
724 HB_336_HD
725 HB_339_HD
726 HB_341_HD
727 HB_344_HD
728 HB_348_HD
729 HB_351_HD
730 HB_355_HD
731 HB_361_HD
732 HB_366_HD
733 HB_368_HD
734 HB_370_HD
735 HB_371_HD
736 HB_381_HD
737 HB_384_HD
738 HB_385_HD
739 HB_387_HD
740 HB_390_HD
741 HB_393_HD
742 HB_402_HD
743 HB_405_HD
744 HB_407_HD
745 HB_408_HD
746 HB_415_HD
747 HB_417_HD
748 HB_424_HD
749 HB_444_HD
750 HB_457_HD
751 HB_466_HD
752 HB_467_HD
753 HB_470_HD
754 HB_478_HD
755 HB_487_HD
756 HB_511_HD
757 HB_513_HD
758 HB_515_HD
759 HB_518_HD
760 HB_522_HD
761 HB_527_HD
762 HB_528_HD
763 HB_530_HD
764 HB_537_HD
765 HB_549_HD
766 HB_578_HD
767 HB_593_HD
768 HB_610_HD
769 HB_616_HD
770 HB_617_HD
771 HB_626_HD
772 HB_639_HD
773 HB_649_HD
774 HB_661_HD
775 HB_667_HD
776 HB_671_HD
777 HB_681_HD
778 HB_682_HD
779 HB_683_HD
780 HB_691_HD
781 HB_692_HD
782 HB_707_HD
783 HB_709_HD
784 HB_716_HD
785 HB_725_HD
786 HB_732_HD
787 HB_734_HD
788 HB_744_HD
789 HB_748_HD
790 HB_750_HD
791 HB_758_HD
792 HB_760_HD
793 HB_762_HD
794 HB_766_HD
795 HB_768_HD
796 HB_769_HD
797 HB_771_HD
798 HB_774_HD
799 HB_778_HD
800 HB_780_HD
801 HB_790_HD
802 HB_800_HD
803 HB_802_HD

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